Rapid, Structure-Based Exploration of Pipecolic Acid Amides as Novel Selective Antagonists of the FK506-Binding Protein 51

J Med Chem. 2016 Mar 24;59(6):2410-22. doi: 10.1021/acs.jmedchem.5b01355. Epub 2016 Mar 8.

Abstract

The FK506-binding protein 51 (FKBP51) is a key regulator of stress hormone receptors and an established risk factor for stress-related disorders. Drug development for FKBP51 has been impaired by the structurally similar but functionally opposing homologue FKBP52. High selectivity between FKBP51 and FKBP52 can be achieved by ligands that stabilize a recently discovered FKBP51-favoring conformation. However, drug-like parameters for these ligands remained unfavorable. In the present study, we replaced the potentially labile pipecolic ester group of previous FKBP51 ligands by various low molecular weight amides. This resulted in the first series of pipecolic acid amides, which had much lower molecular weights without affecting FKBP51 selectivity. We discovered a geminally substituted cyclopentyl amide as a preferred FKBP51-binding motif and elucidated its binding mode to provide a new lead structure for future drug optimization.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amides / chemical synthesis
  • Amides / pharmacology
  • Animals
  • Cell Line
  • Drug Discovery
  • Humans
  • Models, Molecular
  • Molecular Conformation
  • Molecular Weight
  • Neurites / drug effects
  • Pipecolic Acids / chemical synthesis*
  • Pipecolic Acids / pharmacology*
  • Risk Factors
  • Structure-Activity Relationship
  • Tacrolimus Binding Proteins / drug effects*
  • X-Ray Diffraction

Substances

  • Amides
  • Pipecolic Acids
  • Tacrolimus Binding Proteins
  • tacrolimus binding protein 5
  • pipecolic acid